Coding

Part:BBa_K2933005

Designed by: Dongxu Li   Group: iGEM19_TJUSLS_China   (2019-09-05)


subclass B1 metallo-beta-lactamase MYX-1, codon optimized in E. coli

This part encodes a protein called MYX-1, which is a metallo-beta-lactamase of subclass B1.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 80
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 80
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 80
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 80
  • 1000
    COMPATIBLE WITH RFC[1000]


Usage and Biology

MYX-1 is a type of subclass B1 metal beta-lactamases, which is found from Myxococcus xanthus. The beta lactamases of subclass B1 family can hydrolyze almost all available beta lactam antibiotics (except aztreonam) clinically, including the broad-spectrum antibiotic carbapenems. Because of the extensive substrate profile of this enzyme, the clinical strains carrying it become a great threat to human life and health.

Molecular cloning

First, we used the vector pGEX-6p-1 to construct our expression plasmid. And then we converted the plasmid constructed to E. coli DH5α to expand the plasmid largely.

T--TJUSLS China--MYX-1 PCRmeiqie.png T--TJUSLS China--MYX-1 meiqie.png
Figure 1. Left: The PCR result of MYX-1. Right: The verification results by enzyme digestion.

After verification, it was determined that the construction is successful. We converted the plasmid to E. coli BL21(DE3) for expression and purification.

References

[1]Correction for Goldman et al., Evolution of sensory complexity recorded in a myxobacterial genome. Proc Natl Acad Sci U S A. 2006;103(51):19605. doi:10.1073/pnas.0609567103.

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